WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F09C6.9.1 Sequence Name  F09C6.9.1
Length (nt)  1428   Chromosome Location  V: 16912234-16915350
Chromosome . Primary Identifier  V Chromosome Location . Start  16912234
Chromosome Location . End  16915350 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F09C6.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003706 nhr-116 F09C6.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F09C6.9 F09C6.9 1347   V: 16912241-16912294

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F09C6.9.1 16912234 16915350 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon213133   61   V: 16912234-16912294 Caenorhabditis elegans
Exon213134   241   V: 16912387-16912627 Caenorhabditis elegans
Exon213135   377   V: 16912739-16913115 Caenorhabditis elegans
Exon213136   101   V: 16913165-16913265 Caenorhabditis elegans
Exon213137   207   V: 16914307-16914513 Caenorhabditis elegans
Exon213138   107   V: 16914831-16914937 Caenorhabditis elegans
Exon213139   334   V: 16915017-16915350 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F09C6.9.1 16912234 16915350 1

1 Sequence

Length
1428

1 Sequence Ontology Term

Identifier Name Description
transcript