WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49A5.5a.1 Sequence Name  F49A5.5a.1
Length (nt)  1313   Chromosome Location  V: 16865704-16867293
Chromosome . Primary Identifier  V Chromosome Location . Start  16865704
Chromosome Location . End  16867293 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49A5.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009857 clec-28 F49A5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49A5.5a F49A5.5a 1209   V: 16865741-16865936

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F49A5.5a.1 16865704 16867293 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon213042   233   V: 16865704-16865936 Caenorhabditis elegans
Exon213044   177   V: 16865983-16866159 Caenorhabditis elegans
Exon213046   45   V: 16866204-16866248 Caenorhabditis elegans
Exon213048   149   V: 16866305-16866453 Caenorhabditis elegans
Exon213050   145   V: 16866501-16866645 Caenorhabditis elegans
Exon213052   129   V: 16866689-16866817 Caenorhabditis elegans
Exon213055   435   V: 16866859-16867293 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F49A5.5a.1 16865704 16867293 1

1 Sequence

Length
1313

1 Sequence Ontology Term

Identifier Name Description
transcript