WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y102A5A.1.1 Sequence Name  Y102A5A.1.1
Length (nt)  4701   Chromosome Location  V: 16802872-16814957
Chromosome . Primary Identifier  V Chromosome Location . Start  16802872
Chromosome Location . End  16814957 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y102A5A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013606 cand-1 Y102A5A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y102A5A.1 Y102A5A.1 3825   V: 16802874-16803011

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y102A5A.1.1 16802872 16814957 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon212879   140   V: 16802872-16803011 Caenorhabditis elegans
Exon212880   111   V: 16803504-16803614 Caenorhabditis elegans
Exon212881   255   V: 16804149-16804403 Caenorhabditis elegans
Exon212882   514   V: 16805074-16805587 Caenorhabditis elegans
Exon212883   884   V: 16806405-16807288 Caenorhabditis elegans
Exon212884   177   V: 16807957-16808133 Caenorhabditis elegans
Exon212885   154   V: 16808550-16808703 Caenorhabditis elegans
Exon212886   92   V: 16809202-16809293 Caenorhabditis elegans
Exon212887   638   V: 16810008-16810645 Caenorhabditis elegans
Exon212888   420   V: 16811525-16811944 Caenorhabditis elegans
Exon212889   370   V: 16812718-16813087 Caenorhabditis elegans
Exon212890   946   V: 16814012-16814957 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y102A5A.1.1 16802872 16814957 1

1 Sequence

Length
4701

1 Sequence Ontology Term

Identifier Name Description
transcript