WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00077621 Gene Name  Y70C5C.8
Sequence Name  ? Y70C5C.8 Organism  Caenorhabditis elegans
Automated Description  Is affected by dpy-21 based on RNA-seq studies. Biotype  SO:0000336
Genetic Position  :± Length (nt)  ? 1374
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00077621

Genomics

0 Transcripts

 

Other

0 CDSs

0 RNAi Result

43 Allele

Public Name
gk963271
gk963489
WBVar02123303
WBVar02124908
gk964050
WBVar02123708
gk964297
WBVar02124497
WBVar02124626
WBVar02124059
WBVar02121634
WBVar02122685
WBVar02121794
WBVar01875021
WBVar01875020
WBVar01875018
WBVar01875019
WBVar00041025
WBVar00041020
WBVar01779049
WBVar01779047
WBVar01779048
WBVar01991403
gk258661
gk258660
gk258663
gk258662
WBVar01843284
WBVar00594281
WBVar01634732

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00077621 16711192 16712565 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrV_16710779..16711191   413 V: 16710779-16711191 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in dpy-21(e428) comparing to in N2 during L3 stage. DESeq v1.6.3. Fold change > 1.5. WBPaper00050370:dpy-21(e428)_L3_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00077621 16711192 16712565 -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
1374

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrV_16712566..16713446   881 V: 16712566-16713446 Caenorhabditis elegans