Other
59 Allele
| Public Name |
|---|
| gk963271 |
| gk964458 |
| gk964459 |
| WBVar02124626 |
| WBVar02124261 |
| gk963302 |
| WBVar02122682 |
| WBVar02124830 |
| gk963225 |
| WBVar02124056 |
| WBVar00031400 |
| WBVar02124262 |
| WBVar02124906 |
| WBVar02123704 |
| WBVar02123138 |
| WBVar02123300 |
| WBVar02121288 |
| WBVar02123139 |
| gk835191 |
| gk550241 |
| WBVar01911151 |
| gk257389 |
| gk257388 |
| gk257387 |
| WBVar01633012 |
| WBVar01633013 |
| WBVar01633014 |
| WBVar01633015 |
| gk960174 |
| WBVar01633016 |
1 Chromosome Location
|
Feature . Primary Identifier |
Start | End | Strand |
|---|---|---|---|
| WBGene00008638 | 16144986 | 16145869 | -1 |
1 Downstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrV_16144852..16144985 | 134 | V: 16144852-16144985 | Caenorhabditis elegans |
4 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Transcripts that showed significantly increased expression in ilc-17.1(syb5296) comparing to in N2 animals at L4 larva stage. | DESeq2, fold change > 2, FDR < 0.05. | WBPaper00066594:ilc-17.1(syb5296)_upregulated | |
| Genes significantely Up-regulated by GRO-seq in csr-1 hypomorph vs. N2 using DESeq p < 0.05. | DESeq package with an FDR of < 0.05. | WBPaper00045050:csr-1(hypomorph)_upregulated | |
| Genes found to be regulated by low-copy overexpression of sir-2.1 with p < 0.014. | N.A. | WBPaper00026929:sir-2.1_overexpression_regulated | |
| Genes that are up or down regulated by more than 2.1 fold with the t-test p-value less than 0.01 are included in this cluster. | Genes that are regulated by more than 2.1 fold with the t-test p-value less than 0.01 are included in this cluster. | WBPaper00024393:strongly_regulated_dauer_genes |
2 Expression Patterns
| Remark | Reporter Gene | Primary Identifier | Pattern | Subcellular Localization |
|---|---|---|---|---|
| Expr1148156 | Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/hashimshony2015 | |||
| Expr1015593 | Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012 |
1 Upstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrV_16145870..16147038 | 1169 | V: 16145870-16147038 | Caenorhabditis elegans |
