WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06C6.5a.3 Sequence Name  C06C6.5a.3
Length (nt)  2120   Chromosome Location  V: 15997770-16000601
Chromosome . Primary Identifier  V Chromosome Location . Start  15997770
Chromosome Location . End  16000601 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06C6.5a.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003640 nhr-50 C06C6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06C6.5a C06C6.5a 1080   V: 15997832-15998079

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C06C6.5a.3 15997770 16000601 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon211085   310   V: 15997770-15998079 Caenorhabditis elegans
Exon211091   116   V: 15998340-15998455 Caenorhabditis elegans
Exon211097   182   V: 15998502-15998683 Caenorhabditis elegans
Exon211103   213   V: 15998726-15998938 Caenorhabditis elegans
Exon211109   116   V: 15998995-15999110 Caenorhabditis elegans
Exon211117   1183   V: 15999419-16000601 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C06C6.5a.3 15997770 16000601 -1

1 Sequence

Length
2120

1 Sequence Ontology Term

Identifier Name Description
transcript