WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06C6.5a.1 Sequence Name  C06C6.5a.1
Length (nt)  1361   Chromosome Location  V: 15997726-16000631
Chromosome . Primary Identifier  V Chromosome Location . Start  15997726
Chromosome Location . End  16000631 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06C6.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003640 nhr-50 C06C6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06C6.5a C06C6.5a 1080   V: 15997832-15998079

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C06C6.5a.1 15997726 16000631 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon211083   354   V: 15997726-15998079 Caenorhabditis elegans
Exon211089   116   V: 15998340-15998455 Caenorhabditis elegans
Exon211095   182   V: 15998502-15998683 Caenorhabditis elegans
Exon211101   213   V: 15998726-15998938 Caenorhabditis elegans
Exon211107   116   V: 15998995-15999110 Caenorhabditis elegans
Exon211113   218   V: 15999419-15999636 Caenorhabditis elegans
Exon211120   162   V: 16000470-16000631 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C06C6.5a.1 15997726 16000631 -1

1 Sequence

Length
1361

1 Sequence Ontology Term

Identifier Name Description
transcript