WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00077598 Gene Name  T23D5.16
Sequence Name  ? T23D5.16 Organism  Caenorhabditis elegans
Automated Description  Is affected by dpy-21 based on RNA-seq studies. Biotype  SO:0000336
Genetic Position  :± Length (nt)  ? 390
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00077598

Genomics

0 Transcripts

 

Other

0 CDSs

0 RNAi Result

19 Allele

Public Name
gk963271
gk964458
gk964459
gk964389
WBVar02124261
gk963695
gk963386
gk963387
WBVar02123701
WBVar02123133
gk963561
WBVar02123298
WBVar02121283
tm10586
WBVar00091245
gk256457
ttTi27803
gk526097
gk684100

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00077598 15752853 15753242 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in dpy-21(e428) comparing to in N2 during L3 stage. DESeq v1.6.3. Fold change > 1.5. WBPaper00050370:dpy-21(e428)_L3_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00077598 15752853 15753242 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
390

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrV_15752150..15752852   703 V: 15752150-15752852 Caenorhabditis elegans