WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00077597 Gene Name  T23D5.15
Sequence Name  ? T23D5.15 Organism  Caenorhabditis elegans
Automated Description  Is affected by dpy-21 and daf-2 based on RNA-seq and microarray studies. Biotype  SO:0000336
Genetic Position  :± Length (nt)  ? 209
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00077597

Genomics

0 Transcripts

 

Other

0 CDSs

0 RNAi Result

30 Allele

Public Name
gk963271
gk964458
gk964459
gk964389
WBVar02124261
gk963695
gk963386
gk963387
WBVar02123701
WBVar02123133
gk963561
WBVar02123298
WBVar02121283
tm10586
WBVar00091245
WBVar01591139
WBVar01591140
WBVar01591141
WBVar01591142
WBVar01591143
WBVar01828834
gk256451
WBVar01777309
WBVar01777308
WBVar01777307
WBVar02107536
gk759403
gk749504
WBVar00024335
WBVar00024340

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00077597 15745878 15746086 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrV_15746087..15747039   953 V: 15746087-15747039 Caenorhabditis elegans

2 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in dpy-21(e428) comparing to in N2 during L3 stage. DESeq v1.6.3. Fold change > 1.5. WBPaper00050370:dpy-21(e428)_L3_upregulated
  Transcripts that showed significantly decreased expression in daf-2(e1370) comparing to in N2. Student's t-test, fold change > 2, p-value < 0.05. WBPaper00055386:daf-2(e1370)_downregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00077597 15745878 15746086 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
209

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrV_15745653..15745877   225 V: 15745653-15745877 Caenorhabditis elegans