WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00255573 Gene Name  mir-8197
Sequence Name  ? T09F5.21 Organism  Caenorhabditis elegans
Automated Description  Is affected by daf-12 based on RNA-seq studies. Biotype  SO:0001265
Genetic Position  :± Length (nt)  ? 69
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00255573

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T09F5.21a T09F5.21a 22   V: 15150353-15150374
Transcript:T09F5.21b T09F5.21b 21   V: 15150401-15150421
 

Other

0 CDSs

2 RNAi Result

WormBase ID
WBRNAi00018507
WBRNAi00035398

5 Allele

Public Name
gk963271
gk963301
gk964458
gk964459
WBVar01744742

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00255573 15150353 15150421 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in PVD neurons isolated from TV22833 wyIs840(ser2prom3::daf-12a(rh273)::gfpnovo2, Pmyo-2::gfp); wyIs592(ser2prom3::myr-gfp), comparing to in PVD neurons isolated from animals that only expressed wyIs592. Cufflinks 2.2.1 WBPaper00058678:DAF-12_upregulated_PVD

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00255573 15150353 15150421 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
69

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region