WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C48G7.3g.1 Sequence Name  C48G7.3g.1
Length (nt)  4923   Chromosome Location  V: 14784641-14813245
Chromosome . Primary Identifier  V Chromosome Location . Start  14784641
Chromosome Location . End  14813245 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C48G7.3g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008183 rin-1 C48G7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C48G7.3g C48G7.3g 4923   V: 14784641-14784794

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C48G7.3g.1 14784641 14813245 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

23 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon208178   154   V: 14784641-14784794 Caenorhabditis elegans
Exon208183   469   V: 14785180-14785648 Caenorhabditis elegans
Exon208192   1122   V: 14786002-14787123 Caenorhabditis elegans
Exon208201   120   V: 14787178-14787297 Caenorhabditis elegans
Exon208211   169   V: 14787600-14787768 Caenorhabditis elegans
Exon208219   190   V: 14789510-14789699 Caenorhabditis elegans
Exon208227   549   V: 14795926-14796474 Caenorhabditis elegans
Exon208236   82   V: 14797522-14797603 Caenorhabditis elegans
Exon208241   174   V: 14798223-14798396 Caenorhabditis elegans
Exon208247   97   V: 14798971-14799067 Caenorhabditis elegans
Exon208251   172   V: 14799235-14799406 Caenorhabditis elegans
Exon208255   85   V: 14800805-14800889 Caenorhabditis elegans
Exon208259   120   V: 14801778-14801897 Caenorhabditis elegans
Exon208263   54   V: 14802124-14802177 Caenorhabditis elegans
Exon208267   181   V: 14803301-14803481 Caenorhabditis elegans
Exon208271   239   V: 14803754-14803992 Caenorhabditis elegans
Exon208276   147   V: 14804680-14804826 Caenorhabditis elegans
Exon208279   92   V: 14808479-14808570 Caenorhabditis elegans
Exon208282   71   V: 14809053-14809123 Caenorhabditis elegans
Exon208285   226   V: 14809239-14809464 Caenorhabditis elegans
Exon208288   188   V: 14810162-14810349 Caenorhabditis elegans
Exon208291   155   V: 14811356-14811510 Caenorhabditis elegans
Exon208293   67   V: 14813179-14813245 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C48G7.3g.1 14784641 14813245 -1

1 Sequence

Length
4923

1 Sequence Ontology Term

Identifier Name Description
transcript