WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C47E8.8c.1 Sequence Name  C47E8.8c.1
Length (nt)  4002   Chromosome Location  V: 14700226-14707465
Chromosome . Primary Identifier  V Chromosome Location . Start  14700226
Chromosome Location . End  14707465 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C47E8.8c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008145 set-5 C47E8.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C47E8.8c C47E8.8c 4002   V: 14700226-14700455

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C47E8.8c.1 14700226 14707465 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon207989   230   V: 14700226-14700455 Caenorhabditis elegans
Exon207992   165   V: 14700696-14700860 Caenorhabditis elegans
Exon207996   105   V: 14700906-14701010 Caenorhabditis elegans
Exon208000   327   V: 14701315-14701641 Caenorhabditis elegans
Exon208004   105   V: 14701836-14701940 Caenorhabditis elegans
Exon208008   1533   V: 14702148-14703680 Caenorhabditis elegans
Exon208012   114   V: 14703730-14703843 Caenorhabditis elegans
Exon208016   204   V: 14703981-14704184 Caenorhabditis elegans
Exon208020   102   V: 14704580-14704681 Caenorhabditis elegans
Exon208025   126   V: 14704796-14704921 Caenorhabditis elegans
Exon208028   120   V: 14704993-14705112 Caenorhabditis elegans
Exon208032   117   V: 14705376-14705492 Caenorhabditis elegans
Exon208036   114   V: 14705818-14705931 Caenorhabditis elegans
Exon208039   207   V: 14706114-14706320 Caenorhabditis elegans
Exon208043   160   V: 14706605-14706764 Caenorhabditis elegans
Exon208047   213   V: 14706995-14707207 Caenorhabditis elegans
Exon208050   60   V: 14707406-14707465 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C47E8.8c.1 14700226 14707465 1

1 Sequence

Length
4002

1 Sequence Ontology Term

Identifier Name Description
transcript