WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C47E8.8a.1 Sequence Name  C47E8.8a.1
Length (nt)  4817   Chromosome Location  V: 14698966-14707601
Chromosome . Primary Identifier  V Chromosome Location . Start  14698966
Chromosome Location . End  14707601 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C47E8.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008145 set-5 C47E8.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C47E8.8a C47E8.8a 4677   V: 14698970-14699536

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C47E8.8a.1 14698966 14707601 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon207984   571   V: 14698966-14699536 Caenorhabditis elegans
Exon207986   347   V: 14700109-14700455 Caenorhabditis elegans
Exon207990   165   V: 14700696-14700860 Caenorhabditis elegans
Exon207994   105   V: 14700906-14701010 Caenorhabditis elegans
Exon207998   327   V: 14701315-14701641 Caenorhabditis elegans
Exon208002   105   V: 14701836-14701940 Caenorhabditis elegans
Exon208006   1533   V: 14702148-14703680 Caenorhabditis elegans
Exon208010   114   V: 14703730-14703843 Caenorhabditis elegans
Exon208014   204   V: 14703981-14704184 Caenorhabditis elegans
Exon208018   102   V: 14704580-14704681 Caenorhabditis elegans
Exon208022   117   V: 14704796-14704912 Caenorhabditis elegans
Exon208026   120   V: 14704993-14705112 Caenorhabditis elegans
Exon208030   117   V: 14705376-14705492 Caenorhabditis elegans
Exon208034   114   V: 14705818-14705931 Caenorhabditis elegans
Exon208037   207   V: 14706114-14706320 Caenorhabditis elegans
Exon208041   160   V: 14706605-14706764 Caenorhabditis elegans
Exon208045   213   V: 14706995-14707207 Caenorhabditis elegans
Exon208052   196   V: 14707406-14707601 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C47E8.8a.1 14698966 14707601 1

1 Sequence

Length
4817

1 Sequence Ontology Term

Identifier Name Description
transcript