WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T22G5.5a.1 Sequence Name  T22G5.5a.1
Length (nt)  1928   Chromosome Location  V: 13893403-13896415
Chromosome . Primary Identifier  V Chromosome Location . Start  13893403
Chromosome Location . End  13896415 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T22G5.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011932 sptl-3 T22G5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T22G5.5a T22G5.5a 1539   V: 13893413-13893453

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T22G5.5a.1 13893403 13896415 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon205791   51   V: 13893403-13893453 Caenorhabditis elegans
Exon205792   187   V: 13893500-13893686 Caenorhabditis elegans
Exon205794   155   V: 13893864-13894018 Caenorhabditis elegans
Exon205796   146   V: 13894348-13894493 Caenorhabditis elegans
Exon205798   325   V: 13894579-13894903 Caenorhabditis elegans
Exon205800   220   V: 13894948-13895167 Caenorhabditis elegans
Exon205802   96   V: 13895347-13895442 Caenorhabditis elegans
Exon205804   167   V: 13895562-13895728 Caenorhabditis elegans
Exon205806   130   V: 13895788-13895917 Caenorhabditis elegans
Exon205809   451   V: 13895965-13896415 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T22G5.5a.1 13893403 13896415 1

1 Sequence

Length
1928

1 Sequence Ontology Term

Identifier Name Description
transcript