WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C50B6.11.1 Sequence Name  C50B6.11.1
Length (nt)  1101   Chromosome Location  V: 13340240-13343040
Chromosome . Primary Identifier  V Chromosome Location . Start  13340240
Chromosome Location . End  13343040 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C50B6.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008223 lgc-48 C50B6.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C50B6.11 C50B6.11 1101   V: 13340240-13340381

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C50B6.11.1 13340240 13343040 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon204239   142   V: 13340240-13340381 Caenorhabditis elegans
Exon204240   124   V: 13340807-13340930 Caenorhabditis elegans
Exon204241   60   V: 13341258-13341317 Caenorhabditis elegans
Exon204242   115   V: 13341373-13341487 Caenorhabditis elegans
Exon204243   83   V: 13341541-13341623 Caenorhabditis elegans
Exon204244   73   V: 13341803-13341875 Caenorhabditis elegans
Exon204245   54   V: 13341918-13341971 Caenorhabditis elegans
Exon204246   113   V: 13342196-13342308 Caenorhabditis elegans
Exon204247   137   V: 13342357-13342493 Caenorhabditis elegans
Exon204248   161   V: 13342544-13342704 Caenorhabditis elegans
Exon204249   39   V: 13343002-13343040 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C50B6.11.1 13340240 13343040 1

1 Sequence

Length
1101

1 Sequence Ontology Term

Identifier Name Description
transcript