WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54F3.1c.1 Sequence Name  F54F3.1c.1
Length (nt)  4018   Chromosome Location  V: 12910107-12917221
Chromosome . Primary Identifier  V Chromosome Location . Start  12910107
Chromosome Location . End  12917221 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54F3.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003738 nid-1 F54F3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54F3.1c F54F3.1c 3747   V: 12910118-12910222

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54F3.1c.1 12910107 12917221 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon203081   116   V: 12910107-12910222 Caenorhabditis elegans
Exon203086   366   V: 12910652-12911017 Caenorhabditis elegans
Exon203089   167   V: 12911073-12911239 Caenorhabditis elegans
Exon203092   131   V: 12911287-12911417 Caenorhabditis elegans
Exon203095   300   V: 12911463-12911762 Caenorhabditis elegans
Exon203098   251   V: 12911854-12912104 Caenorhabditis elegans
Exon203101   313   V: 12912217-12912529 Caenorhabditis elegans
Exon203104   929   V: 12912839-12913767 Caenorhabditis elegans
Exon203107   124   V: 12913823-12913946 Caenorhabditis elegans
Exon203110   144   V: 12913992-12914135 Caenorhabditis elegans
Exon203120   691   V: 12915816-12916506 Caenorhabditis elegans
Exon203123   486   V: 12916736-12917221 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54F3.1c.1 12910107 12917221 1

1 Sequence

Length
4018

1 Sequence Ontology Term

Identifier Name Description
transcript