WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC116.3.1 Sequence Name  ZC116.3.1
Length (nt)  12216   Chromosome Location  V: 12611329-12628749
Chromosome . Primary Identifier  V Chromosome Location . Start  12611329
Chromosome Location . End  12628749 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC116.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013855 cubn-1 ZC116.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC116.3 ZC116.3 12144   V: 12611347-12611456

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:ZC116.3.1 12611329 12628749 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

42 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon202235   128   V: 12611329-12611456 Caenorhabditis elegans
Exon202236   130   V: 12611507-12611636 Caenorhabditis elegans
Exon202240   132   V: 12612508-12612639 Caenorhabditis elegans
Exon202241   110   V: 12612683-12612792 Caenorhabditis elegans
Exon202242   533   V: 12612847-12613379 Caenorhabditis elegans
Exon202243   347   V: 12613759-12614105 Caenorhabditis elegans
Exon202244   187   V: 12614157-12614343 Caenorhabditis elegans
Exon202245   381   V: 12614728-12615108 Caenorhabditis elegans
Exon202246   594   V: 12615156-12615749 Caenorhabditis elegans
Exon202247   276   V: 12615796-12616071 Caenorhabditis elegans
Exon202248   209   V: 12616120-12616328 Caenorhabditis elegans
Exon202249   898   V: 12616378-12617275 Caenorhabditis elegans
Exon202250   203   V: 12617607-12617809 Caenorhabditis elegans
Exon202251   873   V: 12617853-12618725 Caenorhabditis elegans
Exon202252   106   V: 12618774-12618879 Caenorhabditis elegans
Exon202253   259   V: 12619149-12619407 Caenorhabditis elegans
Exon202254   639   V: 12619461-12620099 Caenorhabditis elegans
Exon202255   415   V: 12620148-12620562 Caenorhabditis elegans
Exon202256   205   V: 12620618-12620822 Caenorhabditis elegans
Exon202257   232   V: 12620886-12621117 Caenorhabditis elegans
Exon202258   161   V: 12621160-12621320 Caenorhabditis elegans
Exon202259   762   V: 12621424-12622185 Caenorhabditis elegans
Exon202260   326   V: 12622263-12622588 Caenorhabditis elegans
Exon202261   70   V: 12622793-12622862 Caenorhabditis elegans
Exon202262   215   V: 12622911-12623125 Caenorhabditis elegans
Exon202263   310   V: 12623177-12623486 Caenorhabditis elegans
Exon202264   138   V: 12623532-12623669 Caenorhabditis elegans
Exon202265   293   V: 12623838-12624130 Caenorhabditis elegans
Exon202268   435   V: 12624586-12625020 Caenorhabditis elegans
Exon202269   373   V: 12625242-12625614 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:ZC116.3.1 12611329 12628749 1

1 Sequence

Length
12216

1 Sequence Ontology Term

Identifier Name Description
transcript