WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W04D2.1a.1 Sequence Name  W04D2.1a.1
Length (nt)  3163   Chromosome Location  V: 12478413-12484444
Chromosome . Primary Identifier  V Chromosome Location . Start  12478413
Chromosome Location . End  12484444 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W04D2.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000228 atn-1 W04D2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W04D2.1a W04D2.1a 2763   V: 12478416-12478538

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:W04D2.1a.1 12478413 12484444 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon201879   126   V: 12478413-12478538 Caenorhabditis elegans
Exon201881   322   V: 12479740-12480061 Caenorhabditis elegans
Exon201885   249   V: 12480362-12480610 Caenorhabditis elegans
Exon201889   161   V: 12480728-12480888 Caenorhabditis elegans
Exon201893   93   V: 12481284-12481376 Caenorhabditis elegans
Exon201897   1027   V: 12481539-12482565 Caenorhabditis elegans
Exon201901   433   V: 12482624-12483056 Caenorhabditis elegans
Exon201905   205   V: 12483187-12483391 Caenorhabditis elegans
Exon201911   547   V: 12483898-12484444 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:W04D2.1a.1 12478413 12484444 1

1 Sequence

Length
3163

1 Sequence Ontology Term

Identifier Name Description
transcript