WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54D10.8a.1 Sequence Name  C54D10.8a.1
Length (nt)  1399   Chromosome Location  V: 12445164-12446995
Chromosome . Primary Identifier  V Chromosome Location . Start  12445164
Chromosome Location . End  12446995 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54D10.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008302 pals-38 C54D10.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54D10.8a C54D10.8a 1221   V: 12445303-12445404

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C54D10.8a.1 12445164 12446995 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon201778   241   V: 12445164-12445404 Caenorhabditis elegans
Exon201780   547   V: 12445452-12445998 Caenorhabditis elegans
Exon201782   77   V: 12446148-12446224 Caenorhabditis elegans
Exon201784   199   V: 12446372-12446570 Caenorhabditis elegans
Exon201786   179   V: 12446617-12446795 Caenorhabditis elegans
Exon201789   156   V: 12446840-12446995 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C54D10.8a.1 12445164 12446995 -1

1 Sequence

Length
1399

1 Sequence Ontology Term

Identifier Name Description
transcript