WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55C5.9.1 Sequence Name  F55C5.9.1
Length (nt)  1701   Chromosome Location  V: 12291861-12294196
Chromosome . Primary Identifier  V Chromosome Location . Start  12291861
Chromosome Location . End  12294196 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55C5.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005241 srh-16 F55C5.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55C5.9 F55C5.9 1002   V: 12292214-12292257

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F55C5.9.1 12291861 12294196 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon201376   169   V: 12291861-12292029 Caenorhabditis elegans
Exon201377   180   V: 12292078-12292257 Caenorhabditis elegans
Exon201378   126   V: 12292303-12292428 Caenorhabditis elegans
Exon201379   146   V: 12292477-12292622 Caenorhabditis elegans
Exon201380   203   V: 12292680-12292882 Caenorhabditis elegans
Exon201381   231   V: 12293229-12293459 Caenorhabditis elegans
Exon201382   79   V: 12293504-12293582 Caenorhabditis elegans
Exon201383   567   V: 12293630-12294196 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F55C5.9.1 12291861 12294196 1

1 Sequence

Length
1701

1 Sequence Ontology Term

Identifier Name Description
transcript