WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55C5.7a.1 Sequence Name  F55C5.7a.1
Length (nt)  2718   Chromosome Location  V: 12284060-12288615
Chromosome . Primary Identifier  V Chromosome Location . Start  12284060
Chromosome Location . End  12288615 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55C5.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010096 rskd-1 F55C5.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55C5.7a F55C5.7a 2547   V: 12284218-12284479

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F55C5.7a.1 12284060 12288615 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon201355   420   V: 12284060-12284479 Caenorhabditis elegans
Exon201356   767   V: 12284523-12285289 Caenorhabditis elegans
Exon201357   654   V: 12285341-12285994 Caenorhabditis elegans
Exon201358   134   V: 12286857-12286990 Caenorhabditis elegans
Exon201359   133   V: 12287035-12287167 Caenorhabditis elegans
Exon201361   52   V: 12287370-12287421 Caenorhabditis elegans
Exon201362   101   V: 12287468-12287568 Caenorhabditis elegans
Exon201364   110   V: 12287985-12288094 Caenorhabditis elegans
Exon201366   265   V: 12288199-12288463 Caenorhabditis elegans
Exon201368   82   V: 12288534-12288615 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F55C5.7a.1 12284060 12288615 -1

1 Sequence

Length
2718

1 Sequence Ontology Term

Identifier Name Description
transcript