WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F57F5.2c.1 Sequence Name  F57F5.2c.1
Length (nt)  2844   Chromosome Location  V: 11995868-12001776
Chromosome . Primary Identifier  V Chromosome Location . Start  11995868
Chromosome Location . End  12001776 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57F5.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001553 gcy-33 F57F5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F57F5.2c F57F5.2c 2844   V: 11995868-11995993

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F57F5.2c.1 11995868 12001776 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon200306   126   V: 11995868-11995993 Caenorhabditis elegans
Exon200309   90   V: 11996042-11996131 Caenorhabditis elegans
Exon200314   132   V: 11996625-11996756 Caenorhabditis elegans
Exon200317   382   V: 11996805-11997186 Caenorhabditis elegans
Exon200319   120   V: 11997318-11997437 Caenorhabditis elegans
Exon200321   272   V: 11998067-11998338 Caenorhabditis elegans
Exon200323   325   V: 11998386-11998710 Caenorhabditis elegans
Exon200325   460   V: 11999072-11999531 Caenorhabditis elegans
Exon200328   362   V: 11999730-12000091 Caenorhabditis elegans
Exon200330   503   V: 12000147-12000649 Caenorhabditis elegans
Exon200331   72   V: 12001705-12001776 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F57F5.2c.1 11995868 12001776 -1

1 Sequence

Length
2844

1 Sequence Ontology Term

Identifier Name Description
transcript