WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F57F5.2a.1 Sequence Name  F57F5.2a.1
Length (nt)  2922   Chromosome Location  V: 11995805-12001797
Chromosome . Primary Identifier  V Chromosome Location . Start  11995805
Chromosome Location . End  12001797 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57F5.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001553 gcy-33 F57F5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F57F5.2a F57F5.2a 2838   V: 11995868-11995993

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F57F5.2a.1 11995805 12001797 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon200304   189   V: 11995805-11995993 Caenorhabditis elegans
Exon200307   90   V: 11996042-11996131 Caenorhabditis elegans
Exon200312   132   V: 11996625-11996756 Caenorhabditis elegans
Exon200316   382   V: 11996805-11997186 Caenorhabditis elegans
Exon200318   120   V: 11997318-11997437 Caenorhabditis elegans
Exon200320   272   V: 11998067-11998338 Caenorhabditis elegans
Exon200322   325   V: 11998386-11998710 Caenorhabditis elegans
Exon200324   454   V: 11999072-11999525 Caenorhabditis elegans
Exon200327   362   V: 11999730-12000091 Caenorhabditis elegans
Exon200329   503   V: 12000147-12000649 Caenorhabditis elegans
Exon200332   93   V: 12001705-12001797 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F57F5.2a.1 11995805 12001797 -1

1 Sequence

Length
2922

1 Sequence Ontology Term

Identifier Name Description
transcript