WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C52E4.6a.1 Sequence Name  C52E4.6a.1
Length (nt)  1624   Chromosome Location  V: 11991011-11993723
Chromosome . Primary Identifier  V Chromosome Location . Start  11991011
Chromosome Location . End  11993723 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C52E4.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000876 cyl-1 C52E4.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C52E4.6a C52E4.6a 1443   V: 11991164-11991238

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C52E4.6a.1 11991011 11993723 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon200282   228   V: 11991011-11991238 Caenorhabditis elegans
Exon200284   723   V: 11991320-11992042 Caenorhabditis elegans
Exon200286   64   V: 11992085-11992148 Caenorhabditis elegans
Exon200289   134   V: 11992918-11993051 Caenorhabditis elegans
Exon200291   138   V: 11993098-11993235 Caenorhabditis elegans
Exon200293   109   V: 11993285-11993393 Caenorhabditis elegans
Exon200295   128   V: 11993449-11993576 Caenorhabditis elegans
Exon200298   100   V: 11993624-11993723 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C52E4.6a.1 11991011 11993723 -1

1 Sequence

Length
1624

1 Sequence Ontology Term

Identifier Name Description
transcript