WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C52E4.4.1 Sequence Name  C52E4.4.1
Length (nt)  1513   Chromosome Location  V: 11980534-11982397
Chromosome . Primary Identifier  V Chromosome Location . Start  11980534
Chromosome Location . End  11982397 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C52E4.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004501 rpt-1 C52E4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C52E4.4 C52E4.4 1308   V: 11980736-11981089

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C52E4.4.1 11980534 11982397 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon200268   556   V: 11980534-11981089 Caenorhabditis elegans
Exon200270   543   V: 11981303-11981845 Caenorhabditis elegans
Exon200271   231   V: 11981893-11982123 Caenorhabditis elegans
Exon200272   104   V: 11982169-11982272 Caenorhabditis elegans
Exon200273   79   V: 11982319-11982397 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C52E4.4.1 11980534 11982397 -1

1 Sequence

Length
1513

1 Sequence Ontology Term

Identifier Name Description
transcript