WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R31.1f Sequence Name  R31.1f
Length (nt)  11613   Chromosome Location  V: 11902833-11903069
Chromosome . Primary Identifier  V Chromosome Location . Start  11902833
Chromosome Location . End  11903069
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R31.1f

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53064 SMA-1, isoform f 448.6 3870 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00083130
WBRNAi00082909
WBRNAi00026129
WBRNAi00009083
WBRNAi00052022
WBRNAi00113741
WBRNAi00064314
WBRNAi00078483
WBRNAi00081111
WBRNAi00113745

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:R31.1f 11902833 11903069 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004855 sma-1 R31.1 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier 		Start End Strand
CDS:R31.1f 11902833 11903069 1
CDS:R31.1f 11903115 11903498 1
CDS:R31.1f 11903545 11905043 1
CDS:R31.1f 11905092 11907249 1
CDS:R31.1f 11907299 11908854 1
CDS:R31.1f 11908906 11909994 1
CDS:R31.1f 11910199 11910357 1
CDS:R31.1f 11910406 11912032 1
CDS:R31.1f 11912081 11913992 1
CDS:R31.1f 11914065 11914580 1
CDS:R31.1f 11914737 11914883 1
CDS:R31.1f 11915717 11915775 1
CDS:R31.1f 11915824 11916040 1
CDS:R31.1f 11916089 11916141 1

1 Sequence

Length
11613

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R31.1f.1 R31.1f.1 11613   V: 11902833-11916141