WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R31.1e.1 Sequence Name  R31.1e.1
Length (nt)  12171   Chromosome Location  V: 11899564-11916141
Chromosome . Primary Identifier  V Chromosome Location . Start  11899564
Chromosome Location . End  11916141 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R31.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004855 sma-1 R31.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R31.1e R31.1e 12171   V: 11899564-11899630

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R31.1e.1 11899564 11916141 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon200032   67   V: 11899564-11899630 Caenorhabditis elegans
Exon200036   263   V: 11901108-11901370 Caenorhabditis elegans
Exon200042   180   V: 11901996-11902175 Caenorhabditis elegans
Exon200046   285   V: 11902785-11903069 Caenorhabditis elegans
Exon200053   384   V: 11903115-11903498 Caenorhabditis elegans
Exon200059   1499   V: 11903545-11905043 Caenorhabditis elegans
Exon200065   2158   V: 11905092-11907249 Caenorhabditis elegans
Exon200071   1556   V: 11907299-11908854 Caenorhabditis elegans
Exon200077   1089   V: 11908906-11909994 Caenorhabditis elegans
Exon200083   159   V: 11910199-11910357 Caenorhabditis elegans
Exon200089   1627   V: 11910406-11912032 Caenorhabditis elegans
Exon200095   1912   V: 11912081-11913992 Caenorhabditis elegans
Exon200101   516   V: 11914065-11914580 Caenorhabditis elegans
Exon200107   147   V: 11914737-11914883 Caenorhabditis elegans
Exon200116   59   V: 11915717-11915775 Caenorhabditis elegans
Exon200122   217   V: 11915824-11916040 Caenorhabditis elegans
Exon200126   53   V: 11916089-11916141 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R31.1e.1 11899564 11916141 1

1 Sequence

Length
12171

1 Sequence Ontology Term

Identifier Name Description
transcript