WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R13H4.1.1 Sequence Name  R13H4.1.1
Length (nt)  4102   Chromosome Location  V: 11831197-11843728
Chromosome . Primary Identifier  V Chromosome Location . Start  11831197
Chromosome Location . End  11843728 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R13H4.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011261 nphp-4 R13H4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R13H4.1 R13H4.1 3918   V: 11831278-11831358

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R13H4.1.1 11831197 11843728 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon199844   162   V: 11831197-11831358 Caenorhabditis elegans
Exon199845   168   V: 11831402-11831569 Caenorhabditis elegans
Exon199846   146   V: 11832414-11832559 Caenorhabditis elegans
Exon199854   128   V: 11835958-11836085 Caenorhabditis elegans
Exon199885   105   V: 11838027-11838131 Caenorhabditis elegans
Exon199886   634   V: 11838177-11838810 Caenorhabditis elegans
Exon199887   396   V: 11838990-11839385 Caenorhabditis elegans
Exon199890   277   V: 11840312-11840588 Caenorhabditis elegans
Exon199891   181   V: 11840631-11840811 Caenorhabditis elegans
Exon199892   873   V: 11841010-11841882 Caenorhabditis elegans
Exon199893   137   V: 11841944-11842080 Caenorhabditis elegans
Exon199894   188   V: 11842250-11842437 Caenorhabditis elegans
Exon199895   191   V: 11842487-11842677 Caenorhabditis elegans
Exon199896   76   V: 11842727-11842802 Caenorhabditis elegans
Exon199897   82   V: 11843197-11843278 Caenorhabditis elegans
Exon199898   129   V: 11843323-11843451 Caenorhabditis elegans
Exon199899   229   V: 11843500-11843728 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R13H4.1.1 11831197 11843728 -1

1 Sequence

Length
4102

1 Sequence Ontology Term

Identifier Name Description
transcript