WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55A11.2.1 Sequence Name  F55A11.2.1
Length (nt)  1502   Chromosome Location  V: 11764904-11767222
Chromosome . Primary Identifier  V Chromosome Location . Start  11764904
Chromosome Location . End  11767222 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55A11.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006373 syx-5 F55A11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55A11.2 F55A11.2 1242   V: 11764919-11765107

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F55A11.2.1 11764904 11767222 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon199619   204   V: 11764904-11765107 Caenorhabditis elegans
Exon199620   183   V: 11765184-11765366 Caenorhabditis elegans
Exon199621   472   V: 11765609-11766080 Caenorhabditis elegans
Exon199622   98   V: 11766126-11766223 Caenorhabditis elegans
Exon199623   545   V: 11766678-11767222 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F55A11.2.1 11764904 11767222 1

1 Sequence

Length
1502

1 Sequence Ontology Term

Identifier Name Description
transcript