WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T27F2.2i.1 Sequence Name  T27F2.2i.1
Length (nt)  2820   Chromosome Location  V: 11631872-11637206
Chromosome . Primary Identifier  V Chromosome Location . Start  11631872
Chromosome Location . End  11637206 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T27F2.2i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012100 sipa-1 T27F2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T27F2.2i T27F2.2i 2820   V: 11631872-11631940

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T27F2.2i.1 11631872 11637206 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon199187   69   V: 11631872-11631940 Caenorhabditis elegans
Exon199197   141   V: 11632132-11632272 Caenorhabditis elegans
Exon199209   142   V: 11632320-11632461 Caenorhabditis elegans
Exon199234   462   V: 11632712-11633173 Caenorhabditis elegans
Exon199247   241   V: 11633252-11633492 Caenorhabditis elegans
Exon199260   138   V: 11633542-11633679 Caenorhabditis elegans
Exon199273   468   V: 11633738-11634205 Caenorhabditis elegans
Exon199286   265   V: 11634253-11634517 Caenorhabditis elegans
Exon199299   122   V: 11634565-11634686 Caenorhabditis elegans
Exon199312   576   V: 11634797-11635372 Caenorhabditis elegans
Exon199325   196   V: 11637011-11637206 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T27F2.2i.1 11631872 11637206 -1

1 Sequence

Length
2820

1 Sequence Ontology Term

Identifier Name Description
transcript