WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T27F2.2b.1 Sequence Name  T27F2.2b.1
Length (nt)  3397   Chromosome Location  V: 11631521-11637291
Chromosome . Primary Identifier  V Chromosome Location . Start  11631521
Chromosome Location . End  11637291 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T27F2.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012100 sipa-1 T27F2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T27F2.2b T27F2.2b 2961   V: 11631872-11631940

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T27F2.2b.1 11631521 11637291 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon199185   420   V: 11631521-11631940 Caenorhabditis elegans
Exon199190   141   V: 11632132-11632272 Caenorhabditis elegans
Exon199203   142   V: 11632320-11632461 Caenorhabditis elegans
Exon199224   141   V: 11632527-11632667 Caenorhabditis elegans
Exon199227   462   V: 11632712-11633173 Caenorhabditis elegans
Exon199240   241   V: 11633252-11633492 Caenorhabditis elegans
Exon199253   138   V: 11633542-11633679 Caenorhabditis elegans
Exon199266   468   V: 11633738-11634205 Caenorhabditis elegans
Exon199279   265   V: 11634253-11634517 Caenorhabditis elegans
Exon199292   122   V: 11634565-11634686 Caenorhabditis elegans
Exon199305   576   V: 11634797-11635372 Caenorhabditis elegans
Exon199328   281   V: 11637011-11637291 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T27F2.2b.1 11631521 11637291 -1

1 Sequence

Length
3397

1 Sequence Ontology Term

Identifier Name Description
transcript