WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T27F2.2l.1 Sequence Name  T27F2.2l.1
Length (nt)  3518   Chromosome Location  V: 11631430-11637291
Chromosome . Primary Identifier  V Chromosome Location . Start  11631430
Chromosome Location . End  11637291 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T27F2.2l.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012100 sipa-1 T27F2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T27F2.2l T27F2.2l 2991   V: 11631872-11631940

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T27F2.2l.1 11631430 11637291 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon199180   511   V: 11631430-11631940 Caenorhabditis elegans
Exon199200   141   V: 11632132-11632272 Caenorhabditis elegans
Exon199213   148   V: 11632320-11632467 Caenorhabditis elegans
Exon199221   138   V: 11632527-11632664 Caenorhabditis elegans
Exon199237   462   V: 11632712-11633173 Caenorhabditis elegans
Exon199250   241   V: 11633252-11633492 Caenorhabditis elegans
Exon199263   138   V: 11633542-11633679 Caenorhabditis elegans
Exon199276   468   V: 11633738-11634205 Caenorhabditis elegans
Exon199289   265   V: 11634253-11634517 Caenorhabditis elegans
Exon199302   122   V: 11634565-11634686 Caenorhabditis elegans
Exon199315   576   V: 11634797-11635372 Caenorhabditis elegans
Exon199323   308   V: 11636984-11637291 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T27F2.2l.1 11631430 11637291 -1

1 Sequence

Length
3518

1 Sequence Ontology Term

Identifier Name Description
transcript