WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T27F2.2m.1 Sequence Name  T27F2.2m.1
Length (nt)  3485   Chromosome Location  V: 11631425-11637280
Chromosome . Primary Identifier  V Chromosome Location . Start  11631425
Chromosome Location . End  11637280 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T27F2.2m.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012100 sipa-1 T27F2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T27F2.2m T27F2.2m 2964   V: 11631872-11631940

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T27F2.2m.1 11631425 11637280 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon199177   516   V: 11631425-11631940 Caenorhabditis elegans
Exon199201   141   V: 11632132-11632272 Caenorhabditis elegans
Exon199214   148   V: 11632320-11632467 Caenorhabditis elegans
Exon199222   138   V: 11632527-11632664 Caenorhabditis elegans
Exon199238   462   V: 11632712-11633173 Caenorhabditis elegans
Exon199251   241   V: 11633252-11633492 Caenorhabditis elegans
Exon199264   138   V: 11633542-11633679 Caenorhabditis elegans
Exon199277   468   V: 11633738-11634205 Caenorhabditis elegans
Exon199290   265   V: 11634253-11634517 Caenorhabditis elegans
Exon199303   122   V: 11634565-11634686 Caenorhabditis elegans
Exon199316   576   V: 11634797-11635372 Caenorhabditis elegans
Exon199327   270   V: 11637011-11637280 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T27F2.2m.1 11631425 11637280 -1

1 Sequence

Length
3485

1 Sequence Ontology Term

Identifier Name Description
transcript