WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T27F2.2j.1 Sequence Name  T27F2.2j.1
Length (nt)  3346   Chromosome Location  V: 11631424-11637206
Chromosome . Primary Identifier  V Chromosome Location . Start  11631424
Chromosome Location . End  11637206 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T27F2.2j.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012100 sipa-1 T27F2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T27F2.2j T27F2.2j 2898   V: 11631872-11631940

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T27F2.2j.1 11631424 11637206 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon199176   517   V: 11631424-11631940 Caenorhabditis elegans
Exon199198   141   V: 11632132-11632272 Caenorhabditis elegans
Exon199211   148   V: 11632320-11632467 Caenorhabditis elegans
Exon199217   45   V: 11632527-11632571 Caenorhabditis elegans
Exon199235   462   V: 11632712-11633173 Caenorhabditis elegans
Exon199248   241   V: 11633252-11633492 Caenorhabditis elegans
Exon199261   138   V: 11633542-11633679 Caenorhabditis elegans
Exon199274   468   V: 11633738-11634205 Caenorhabditis elegans
Exon199287   265   V: 11634253-11634517 Caenorhabditis elegans
Exon199300   122   V: 11634565-11634686 Caenorhabditis elegans
Exon199313   576   V: 11634797-11635372 Caenorhabditis elegans
Exon199318   223   V: 11636984-11637206 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T27F2.2j.1 11631424 11637206 -1

1 Sequence

Length
3346

1 Sequence Ontology Term

Identifier Name Description
transcript