WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F38B7.1a.1 Sequence Name  F38B7.1a.1
Length (nt)  2496   Chromosome Location  V: 11527831-11541219
Chromosome . Primary Identifier  V Chromosome Location . Start  11527831
Chromosome Location . End  11541219 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F38B7.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009532 ccch-1 F38B7.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F38B7.1a F38B7.1a 1383   V: 11527957-11528045

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F38B7.1a.1 11527831 11541219 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon198903   67   V: 11527831-11527897 Caenorhabditis elegans
Exon198904   100   V: 11527946-11528045 Caenorhabditis elegans
Exon198905   70   V: 11528131-11528200 Caenorhabditis elegans
Exon198911   206   V: 11536056-11536261 Caenorhabditis elegans
Exon198913   104   V: 11536593-11536696 Caenorhabditis elegans
Exon198916   316   V: 11538932-11539247 Caenorhabditis elegans
Exon198918   287   V: 11539345-11539631 Caenorhabditis elegans
Exon198920   115   V: 11539735-11539849 Caenorhabditis elegans
Exon198922   80   V: 11539902-11539981 Caenorhabditis elegans
Exon198924   1151   V: 11540069-11541219 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F38B7.1a.1 11527831 11541219 1

1 Sequence

Length
2496

1 Sequence Ontology Term

Identifier Name Description
transcript