WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C55A6.9.1 Sequence Name  C55A6.9.1
Length (nt)  1420   Chromosome Location  V: 11521703-11523384
Chromosome . Primary Identifier  V Chromosome Location . Start  11521703
Chromosome Location . End  11523384 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C55A6.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008338 pafo-1 C55A6.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C55A6.9 C55A6.9 1278   V: 11521766-11521806

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C55A6.9.1 11521703 11523384 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon198895   104   V: 11521703-11521806 Caenorhabditis elegans
Exon198896   102   V: 11521858-11521959 Caenorhabditis elegans
Exon198897   127   V: 11522009-11522135 Caenorhabditis elegans
Exon198898   261   V: 11522190-11522450 Caenorhabditis elegans
Exon198899   610   V: 11522503-11523112 Caenorhabditis elegans
Exon198900   216   V: 11523169-11523384 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C55A6.9.1 11521703 11523384 1

1 Sequence

Length
1420

1 Sequence Ontology Term

Identifier Name Description
transcript