WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00199216 Gene Name  K03B8.21
Sequence Name  ? K03B8.21 Organism  Caenorhabditis elegans
Automated Description  Is affected by adr-1 and adr-2 based on RNA-seq studies. Biotype  SO:0001263
Genetic Position  :± Length (nt)  ? 77
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00199216

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K03B8.21 K03B8.21 77   V: 11395505-11395581
 

Other

0 CDSs

0 RNAi Result

5 Allele

Public Name
gk963271
gk963301
gk964451
gk964452
gk964250

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00199216 11395505 11395581 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrV_11395125..11395504   380 V: 11395125-11395504 Caenorhabditis elegans

2 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in adr-1(tm668) and adr-1(gv6) comparing to in N2 at L4 larva stage. DESeq FDR <= 0.05 WBPaper00056617:adr-1_upregulated_L4_transcript
  Transcripts that showed significantly increased expression in adr-2(ok735) and adr-2(gv42) comparing to in N2 at L4 larva stage. DESeq FDR <= 0.05 WBPaper00056617:adr-2_upregulated_L4_transcript

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00199216 11395505 11395581 -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
77

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrV_11395582..11396433   852 V: 11395582-11396433 Caenorhabditis elegans