Genomics
1 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:VK10D6R.3 | VK10D6R.3 |
374
 |
V: 11179318-11181719 |
Other
29 Allele
| Public Name |
|---|
| gk963271 |
| gk963301 |
| gk964451 |
| gk964452 |
| gk796270 |
| gk423063 |
| gk773344 |
| gk457372 |
| gk517625 |
| gk738095 |
| gk853075 |
| gk914353 |
| gk738096 |
| gk605857 |
| gk478606 |
| gk426792 |
| WBVar02060976 |
| WBVar01865556 |
| WBVar01865555 |
| ttTi15634 |
| gk246945 |
| WBVar00003795 |
| gk246943 |
| WBVar02024330 |
| gk246944 |
| gk246942 |
| gk948948 |
| WBVar01743406 |
| WBVar01743407 |
1 Chromosome Location
|
Feature . Primary Identifier |
Start | End | Strand |
|---|---|---|---|
| WBGene00219613 | 11179318 | 11181719 | 1 |
1 Downstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrV_11181720..11183223 | 1504 | V: 11181720-11183223 | Caenorhabditis elegans |
4 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Neuronally enriched transcripts according to a comparison of neuronal nuclei IP samples to total nuclei using isolation of nuclei from tagged specific cell types (INTACT) technology. | DESEQ2, fold change > 2 and FDR < 0.01. | WBPaper00062103:neuron_enriched | |
| Transcripts that showed significantly increased expression in ilc-17.1(syb5296) comparing to in N2 animals at L4 larva stage. | DESeq2, fold change > 2, FDR < 0.05. | WBPaper00066594:ilc-17.1(syb5296)_upregulated | |
| Transcripts that showed significantly decreased expression in ogt-1(ok1474) neuronal cells isolated by FACs comparing to in FACs isolated neuronal cells from wild type. | DESeq2, fold change > 2, FDR < 0.05. | WBPaper00066485:ogt-1(ok1474)_downregulated_neuron | |
| Transcripts that showed significantly increased expression in unc-70(cas983) comparing to in N2 at L1 larva stage. | DESeq2, fold change >= 2, FDR <= 0.05 | WBPaper00057041:unc-70(cas983)_upregulated |
1 Upstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrV_11177678..11179317 | 1640 | V: 11177678-11179317 | Caenorhabditis elegans |
