WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00014841 Gene Name  T19C4.10
Sequence Name  ? T19C4.10 Organism  Caenorhabditis elegans
Automated Description  Enriched in motor neurons based on single-cell RNA-seq studies. Is affected by clk-1 based on microarray studies. Biotype  SO:0000336
Genetic Position  :± Length (nt)  ? 1788
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00014841

Genomics

0 Transcripts

 

Other

0 CDSs

0 RNAi Result

18 Allele

Public Name
gk963271
gk963301
gk964451
gk964452
gk428291
gk480111
gk837701
gk689796
gk879278
gk578567
gk628407
WBVar01865547
WBVar02024327
WBVar02024326
otn2089
gk246917
gk246918
gk246916

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00014841 11165853 11167640 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrV_11164576..11165852   1277 V: 11164576-11165852 Caenorhabditis elegans

4 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Down-regulated genes (fold change > 1.5) in two CoQ-deficient clk-1 mutant strains (e2519, qm30) compared to wild types N2. Fold-changes of intensities were calculated from the arithmetic mean of gene expression values between experimental and corresponding control group. Fold change >= 1.5 was used as cut-off. WBPaper00045774:clk-1_downregulated
  Single-cell RNA-Seq cell group 32_0 expressed in neuron. scVI 0.6.0 WBPaper00065841:32_0
  Single-cell RNA-Seq cell group 117_0 expressed in neuron. scVI 0.6.0 WBPaper00065841:117_0
  Single-cell RNA-Seq cell group 111_0 expressed in neuron. scVI 0.6.0 WBPaper00065841:111_0

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00014841 11165853 11167640 -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
1788

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrV_11167641..11167917   277 V: 11167641-11167917 Caenorhabditis elegans