WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y42A5A.4a.1 Sequence Name  Y42A5A.4a.1
Length (nt)  1129   Chromosome Location  V: 11105499-11107343
Chromosome . Primary Identifier  V Chromosome Location . Start  11105499
Chromosome Location . End  11107343 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y42A5A.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012779 cdkl-1 Y42A5A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y42A5A.4a Y42A5A.4a 1062   V: 11105499-11105666

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y42A5A.4a.1 11105499 11107343 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon197686   168   V: 11105499-11105666 Caenorhabditis elegans
Exon197687   122   V: 11106083-11106204 Caenorhabditis elegans
Exon197690   164   V: 11106247-11106410 Caenorhabditis elegans
Exon197693   198   V: 11106533-11106730 Caenorhabditis elegans
Exon197696   140   V: 11106780-11106919 Caenorhabditis elegans
Exon197699   129   V: 11106961-11107089 Caenorhabditis elegans
Exon197704   208   V: 11107136-11107343 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y42A5A.4a.1 11105499 11107343 1

1 Sequence

Length
1129

1 Sequence Ontology Term

Identifier Name Description
transcript