WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y42A5A.4b.1 Sequence Name  Y42A5A.4b.1
Length (nt)  1600   Chromosome Location  V: 11098899-11107339
Chromosome . Primary Identifier  V Chromosome Location . Start  11098899
Chromosome Location . End  11107339 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y42A5A.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012779 cdkl-1 Y42A5A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y42A5A.4b Y42A5A.4b 1455   V: 11098981-11099085

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y42A5A.4b.1 11098899 11107339 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon197679   187   V: 11098899-11099085 Caenorhabditis elegans
Exon197681   191   V: 11099308-11099498 Caenorhabditis elegans
Exon197682   72   V: 11103035-11103106 Caenorhabditis elegans
Exon197684   193   V: 11105474-11105666 Caenorhabditis elegans
Exon197688   122   V: 11106083-11106204 Caenorhabditis elegans
Exon197691   164   V: 11106247-11106410 Caenorhabditis elegans
Exon197694   198   V: 11106533-11106730 Caenorhabditis elegans
Exon197697   140   V: 11106780-11106919 Caenorhabditis elegans
Exon197700   129   V: 11106961-11107089 Caenorhabditis elegans
Exon197703   204   V: 11107136-11107339 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y42A5A.4b.1 11098899 11107339 1

1 Sequence

Length
1600

1 Sequence Ontology Term

Identifier Name Description
transcript