WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y42A5A.1.1 Sequence Name  Y42A5A.1.1
Length (nt)  3708   Chromosome Location  V: 11087948-11097985
Chromosome . Primary Identifier  V Chromosome Location . Start  11087948
Chromosome Location . End  11097985 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y42A5A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012776 Y42A5A.1 Y42A5A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y42A5A.1 Y42A5A.1 3138   V: 11088154-11088190

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y42A5A.1.1 11087948 11097985 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon197636   243   V: 11087948-11088190 Caenorhabditis elegans
Exon197638   484   V: 11089127-11089610 Caenorhabditis elegans
Exon197639   163   V: 11089659-11089821 Caenorhabditis elegans
Exon197640   158   V: 11089865-11090022 Caenorhabditis elegans
Exon197641   159   V: 11090517-11090675 Caenorhabditis elegans
Exon197642   112   V: 11090722-11090833 Caenorhabditis elegans
Exon197643   121   V: 11090884-11091004 Caenorhabditis elegans
Exon197664   48   V: 11093939-11093986 Caenorhabditis elegans
Exon197665   224   V: 11094034-11094257 Caenorhabditis elegans
Exon197666   269   V: 11094469-11094737 Caenorhabditis elegans
Exon197667   154   V: 11094830-11094983 Caenorhabditis elegans
Exon197668   342   V: 11095030-11095371 Caenorhabditis elegans
Exon197672   90   V: 11096242-11096331 Caenorhabditis elegans
Exon197673   89   V: 11096381-11096469 Caenorhabditis elegans
Exon197674   141   V: 11096516-11096656 Caenorhabditis elegans
Exon197675   168   V: 11096705-11096872 Caenorhabditis elegans
Exon197676   135   V: 11096926-11097060 Caenorhabditis elegans
Exon197677   82   V: 11097115-11097196 Caenorhabditis elegans
Exon197678   526   V: 11097460-11097985 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y42A5A.1.1 11087948 11097985 1

1 Sequence

Length
3708

1 Sequence Ontology Term

Identifier Name Description
transcript