WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C13G3.3a Sequence Name  C13G3.3a
Length (nt)  1674   Chromosome Location  V: 11027513-11027656
Chromosome . Primary Identifier  V Chromosome Location . Start  11027513
Chromosome Location . End  11027656
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C13G3.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE05279 PPTR-2, isoform a 64.4 557 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00040455
WBRNAi00010699
WBRNAi00086451
WBRNAi00086450
WBRNAi00033277
WBRNAi00085912
WBRNAi00064518
WBRNAi00085913
WBRNAi00086448
WBRNAi00062121
WBRNAi00079107

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:C13G3.3a 11027513 11027656 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007554 pptr-2 C13G3.3 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier 		Start End Strand
CDS:C13G3.3a 11027513 11027656 -1
CDS:C13G3.3a 11027713 11028774 -1
CDS:C13G3.3a 11028818 11029131 -1
CDS:C13G3.3a 11029178 11029270 -1
CDS:C13G3.3a 11029322 11029382 -1

1 Sequence

Length
1674

1 Sequence Ontology Term

Identifier Name Description
CDS  

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C13G3.3a.1 C13G3.3a.1 2039   V: 11027153-11029387
Transcript:C13G3.3a.4 C13G3.3a.4 2109   V: 11027167-11030546
Transcript:C13G3.3a.3 C13G3.3a.3 2376   V: 11027167-11034931
Transcript:C13G3.3a.2 C13G3.3a.2 2179   V: 11027179-11030845