WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D1054.13a.1 Sequence Name  D1054.13a.1
Length (nt)  1560   Chromosome Location  V: 10802336-10804186
Chromosome . Primary Identifier  V Chromosome Location . Start  10802336
Chromosome Location . End  10804186 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1054.13a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008379 secs-1 D1054.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D1054.13a D1054.13a 1446   V: 10802450-10802714

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:D1054.13a.1 10802336 10804186 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon196766   379   V: 10802336-10802714 Caenorhabditis elegans
Exon196768   174   V: 10802761-10802934 Caenorhabditis elegans
Exon196770   637   V: 10802978-10803614 Caenorhabditis elegans
Exon196772   119   V: 10803663-10803781 Caenorhabditis elegans
Exon196774   68   V: 10803834-10803901 Caenorhabditis elegans
Exon196776   93   V: 10803954-10804046 Caenorhabditis elegans
Exon196778   90   V: 10804097-10804186 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:D1054.13a.1 10802336 10804186 -1

1 Sequence

Length
1560

1 Sequence Ontology Term

Identifier Name Description
transcript