WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05A2.1.1 Sequence Name  C05A2.1.1
Length (nt)  1493   Chromosome Location  V: 10702549-10704909
Chromosome . Primary Identifier  V Chromosome Location . Start  10702549
Chromosome Location . End  10704909 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05A2.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004083 pph-1 C05A2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05A2.1 C05A2.1 1050   V: 10702565-10702766

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C05A2.1.1 10702549 10704909 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon196484   218   V: 10702549-10702766 Caenorhabditis elegans
Exon196485   119   V: 10702927-10703045 Caenorhabditis elegans
Exon196486   112   V: 10703382-10703493 Caenorhabditis elegans
Exon196488   464   V: 10703820-10704283 Caenorhabditis elegans
Exon196489   580   V: 10704330-10704909 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C05A2.1.1 10702549 10704909 1

1 Sequence

Length
1493

1 Sequence Ontology Term

Identifier Name Description
transcript