WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T21C9.2a.1 Sequence Name  T21C9.2a.1
Length (nt)  3443   Chromosome Location  V: 10566402-10576419
Chromosome . Primary Identifier  V Chromosome Location . Start  10566402
Chromosome Location . End  10576419 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21C9.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006934 vps-54 T21C9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T21C9.2a T21C9.2a 3177   V: 10566655-10566757

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T21C9.2a.1 10566402 10576419 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon196090   356   V: 10566402-10566757 Caenorhabditis elegans
Exon196092   406   V: 10566804-10567209 Caenorhabditis elegans
Exon196094   194   V: 10567254-10567447 Caenorhabditis elegans
Exon196097   1595   V: 10567501-10569095 Caenorhabditis elegans
Exon196098   153   V: 10569143-10569295 Caenorhabditis elegans
Exon196100   105   V: 10571019-10571123 Caenorhabditis elegans
Exon196101   181   V: 10571174-10571354 Caenorhabditis elegans
Exon196125   240   V: 10575445-10575684 Caenorhabditis elegans
Exon196126   213   V: 10576207-10576419 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T21C9.2a.1 10566402 10576419 -1

1 Sequence

Length
3443

1 Sequence Ontology Term

Identifier Name Description
transcript