WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25D1.4.1 Sequence Name  F25D1.4.1
Length (nt)  2630   Chromosome Location  V: 10540324-10545756
Chromosome . Primary Identifier  V Chromosome Location . Start  10540324
Chromosome Location . End  10545756 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25D1.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009109 degt-1 F25D1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25D1.4 F25D1.4 2559   V: 10540381-10540443

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25D1.4.1 10540324 10545756 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon196029   120   V: 10540324-10540443 Caenorhabditis elegans
Exon196030   131   V: 10540493-10540623 Caenorhabditis elegans
Exon196031   171   V: 10542558-10542728 Caenorhabditis elegans
Exon196032   171   V: 10542774-10542944 Caenorhabditis elegans
Exon196033   164   V: 10542992-10543155 Caenorhabditis elegans
Exon196034   413   V: 10543200-10543612 Caenorhabditis elegans
Exon196035   87   V: 10543657-10543743 Caenorhabditis elegans
Exon196036   174   V: 10543803-10543976 Caenorhabditis elegans
Exon196037   119   V: 10544032-10544150 Caenorhabditis elegans
Exon196038   233   V: 10544196-10544428 Caenorhabditis elegans
Exon196039   92   V: 10544474-10544565 Caenorhabditis elegans
Exon196040   435   V: 10544613-10545047 Caenorhabditis elegans
Exon196041   92   V: 10545249-10545340 Caenorhabditis elegans
Exon196042   92   V: 10545487-10545578 Caenorhabditis elegans
Exon196043   136   V: 10545621-10545756 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25D1.4.1 10540324 10545756 1

1 Sequence

Length
2630

1 Sequence Ontology Term

Identifier Name Description
transcript