WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25D1.1a.1 Sequence Name  F25D1.1a.1
Length (nt)  2303   Chromosome Location  V: 10532890-10536388
Chromosome . Primary Identifier  V Chromosome Location . Start  10532890
Chromosome Location . End  10536388 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25D1.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006460 ppm-1.A F25D1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25D1.1a F25D1.1a 1407   V: 10533382-10533720

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F25D1.1a.1 10532890 10536388 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon196001   831   V: 10532890-10533720 Caenorhabditis elegans
Exon196004   362   V: 10534129-10534490 Caenorhabditis elegans
Exon196007   67   V: 10534553-10534619 Caenorhabditis elegans
Exon196010   261   V: 10534670-10534930 Caenorhabditis elegans
Exon196014   69   V: 10534978-10535046 Caenorhabditis elegans
Exon196017   161   V: 10535150-10535310 Caenorhabditis elegans
Exon196019   552   V: 10535837-10536388 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F25D1.1a.1 10532890 10536388 -1

1 Sequence

Length
2303

1 Sequence Ontology Term

Identifier Name Description
transcript