Genomics
1 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:C12D8.25 | C12D8.25 |
141
 |
V: 10247117-10247257 |
Other
10 Allele
| Public Name |
|---|
| gk963301 |
| gk963495 |
| gk963496 |
| gk964351 |
| gk962860 |
| gk964304 |
| gk962746 |
| gk962583 |
| gk538273 |
| gk411790 |
1 Chromosome Location
|
Feature . Primary Identifier |
Start | End | Strand |
|---|---|---|---|
| WBGene00201770 | 10247117 | 10247257 | -1 |
1 Downstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrV_10243206..10247116 | 3911 | V: 10243206-10247116 | Caenorhabditis elegans |
4 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Transcripts that showed significantly increased expression in exos-8(RNAi) animals. | fold change > 2, FDR < 0.05 | WBPaper00068292:exos-8(RNAi)_upregulated | |
| Hypoxia: 7% oxygen. | Transcripts that showed significantly increased expression at animals treated with 7% oxygen, comparing to animals grown at 21% oxygen. | Fold change > 2, p-value < 0.05. | WBPaper00060661:hypoxia_upregulated |
| Bacteria Diet: L. plantarum with pdxH mutant vs. L. plantarum | Transcripts that showed significantly decreased expression in N2 animals fed with L. plantarum with pdxH mutant, comparing to in N2 animals fed with L. plantarum. | GFold3, logFC < -1 or > 1. | WBPaper00066703:L.plantarum-pdxH_downregulated |
| Transcripts that showed significantly increased expression in N2 animals exposed to 30 uM CdCl2 for five days starting from L4. | edgeR, fold change > 2, p < 0.05. | WBPaper00066204:CdCl2_upregulated_mRNA |
1 Upstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrV_10247258..10248904 | 1647 | V: 10247258-10248904 | Caenorhabditis elegans |
