WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C50H2.3a.1 Sequence Name  C50H2.3a.1
Length (nt)  2840   Chromosome Location  V: 9907632-9915121
Chromosome . Primary Identifier  V Chromosome Location . Start  9907632
Chromosome Location . End  9915121 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C50H2.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003173 mec-9 C50H2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C50H2.3a C50H2.3a 2517   V: 9907906-9908144

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C50H2.3a.1 9907632 9915121 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon194156   513   V: 9907632-9908144 Caenorhabditis elegans
Exon194157   255   V: 9908192-9908446 Caenorhabditis elegans
Exon194159   114   V: 9908507-9908620 Caenorhabditis elegans
Exon194161   138   V: 9908663-9908800 Caenorhabditis elegans
Exon194163   138   V: 9908851-9908988 Caenorhabditis elegans
Exon194165   63   V: 9909178-9909240 Caenorhabditis elegans
Exon194167   106   V: 9909377-9909482 Caenorhabditis elegans
Exon194169   92   V: 9909560-9909651 Caenorhabditis elegans
Exon194171   150   V: 9909965-9910114 Caenorhabditis elegans
Exon194173   51   V: 9910296-9910346 Caenorhabditis elegans
Exon194176   110   V: 9912344-9912453 Caenorhabditis elegans
Exon194177   94   V: 9912888-9912981 Caenorhabditis elegans
Exon194178   132   V: 9913029-9913160 Caenorhabditis elegans
Exon194179   105   V: 9913219-9913323 Caenorhabditis elegans
Exon194180   135   V: 9913370-9913504 Caenorhabditis elegans
Exon194181   111   V: 9913548-9913658 Caenorhabditis elegans
Exon194182   192   V: 9913808-9913999 Caenorhabditis elegans
Exon194185   201   V: 9914733-9914933 Caenorhabditis elegans
Exon194186   140   V: 9914982-9915121 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C50H2.3a.1 9907632 9915121 -1

1 Sequence

Length
2840

1 Sequence Ontology Term

Identifier Name Description
transcript